EnhancerDB
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  3. rs2854108[chr1:19973920]
Enhancers that have rs2854108[chr1:19973920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19973102 19981178 enh11574
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Spleen Thymus Heart
Transcript factors that have rs2854108[chr1:19973920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19973918 19973928 HOXB13 JASPAR yes 27208480
chr1 19973920 19973931 FOXC1 JASPAR yes 27208481
chr1 19973920 19973932 FOXC2 JASPAR yes 27208482
Genes associated with rs2854108[chr1:19973920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More