EnhancerDB
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  3. rs28665627[chr1:39567775]
Enhancers that have rs28665627[chr1:39567775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39562325 39585995 enh11758
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus
Transcript factors that have rs28665627[chr1:39567775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39567766 39567781 ZIC3 JASPAR yes 28251280
chr1 39567766 39567781 ZIC4 JASPAR yes 28251281
chr1 39567767 39567781 ZIC1 JASPAR yes 28251282
chr1 39567768 39567781 TFAP2A JASPAR yes 28251283
chr1 39567768 39567781 TFAP2B JASPAR yes 28251284
chr1 39567768 39567781 TFAP2C JASPAR yes 28251285
chr1 39567774 39567781 SP1 TRANSFAC yes 28251286
chr1 39567774 39567784 SP1 JASPAR yes 28251287
Genes associated with rs28665627[chr1:39567775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More