EnhancerDB
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  3. rs2883456[chr17:40552794]
Enhancers that have rs2883456[chr17:40552794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40548447 40554455 enh17160
Cervix (HeLa-S3) Large Intestine Esophagus Bone (Osteoblast) Placenta Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs2883456[chr17:40552794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546874 40564174 ZBTB33 GTRD no Lung (A549) 108260638
chr17 40546896 40561581 ZBTB33 GTRD no Lung (A549) 108260639
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546941 40565998 ZNF274 GTRD no Blood (GM12878) 108260641
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40550454 40553192 TEF1 GTRD no Bone (Osteoblast) 21758672
chr17 40552787 40552796 ZEB1 JASPAR yes 54301374
chr17 40552787 40552802 SCRT1 JASPAR yes 54301375
chr17 40552788 40552798 FIGLA JASPAR yes 54301376
chr17 40552790 40552795 USF2 TRANSFAC yes 54301377
chr17 40552791 40552797 PTF TRANSFAC yes 54301378
Genes associated with rs2883456[chr17:40552794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More