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- rs28875301[chr16:10954718]
Enhancers that have rs28875301[chr16:10954718]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
10954425 |
10958615 |
enh81089 |
|
|
Transcript factors that have rs28875301[chr16:10954718]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
10952989
|
10954983
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108179112
|
|
|
chr16
|
10953226
|
10954854
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108179113
|
|
|
chr16
|
10953356
|
10955068
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108179115
|
|
|
chr16
|
10953360
|
10954902
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108179116
|
|
|
chr16
|
10953511
|
10954732
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108179120
|
|
|
chr16
|
10953523
|
10955748
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108179121
|
|
|
chr16
|
10953532
|
10955544
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108179122
|
|
|
chr16
|
10953557
|
10954731
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108179124
|
|
|
chr16
|
10953584
|
10955307
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108179127
|
|
|
chr16
|
10953818
|
10954928
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108179152
|
|
|
chr16
|
10954708
|
10954723
|
MEF2C
|
JASPAR
|
yes
|
|
9468631
|
|
|
chr16
|
10954709
|
10954724
|
MEF2A
|
JASPAR
|
yes
|
|
9468632
|
|
Genes associated with rs28875301[chr16:10954718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
11348262
|
11350036
|
-
|
SOCS1
|
ENSG00000185338.4
|
11350036
|
393544
|
Esophagus
|
0.263032
|
14541
|
|