EnhancerDB
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  3. rs2979353[chr3:125366109]
Enhancers that have rs2979353[chr3:125366109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 125358805 125372355 enh20888
Liver (HepG2) Prostate (RWPE1) Large Intestine Esophagus Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs2979353[chr3:125366109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 125366107 125366117 ALX3 JASPAR yes 5456287
chr3 125366107 125366117 GSX2 JASPAR yes 5456288
chr3 125366107 125366117 HOXB2 JASPAR yes 5456289
chr3 125366107 125366117 MNX1 JASPAR yes 5456290
chr3 125366107 125366118 HOXA10 JASPAR yes 5456291
chr3 125366108 125366116 LMX1A JASPAR yes 5456292
chr3 125366108 125366116 LMX1B JASPAR yes 5456293
chr3 125366108 125366116 NKX6-1 JASPAR yes 5456294
chr3 125366108 125366116 NKX6-2 JASPAR yes 5456295
chr3 125366108 125366116 VAX1 JASPAR yes 5456296
chr3 125366108 125366116 VAX2 JASPAR yes 5456297
chr3 125366108 125366116 VSX1 JASPAR yes 5456298
chr3 125366108 125366116 VSX2 JASPAR yes 5456299
Genes associated with rs2979353[chr3:125366109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More