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- rs3000754[chr1:112548118]
Enhancers that have rs3000754[chr1:112548118]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
112546094 |
112556055 |
enh67102 |
|
|
Transcript factors that have rs3000754[chr1:112548118]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
112548115
|
112548119
|
LFA1
|
TRANSFAC
|
yes
|
|
31554019
|
|
|
chr1
|
112548116
|
112548126
|
GBX1
|
JASPAR
|
yes
|
|
31554020
|
|
|
chr1
|
112548116
|
112548126
|
GBX2
|
JASPAR
|
yes
|
|
31554021
|
|
|
chr1
|
112548117
|
112548125
|
BARX1
|
JASPAR
|
yes
|
|
31554022
|
|
|
chr1
|
112548117
|
112548125
|
EN1
|
JASPAR
|
yes
|
|
31554023
|
|
|
chr1
|
112548117
|
112548125
|
ISL2
|
JASPAR
|
yes
|
|
31554024
|
|
|
chr1
|
112548117
|
112548125
|
MSX1
|
JASPAR
|
yes
|
|
31554025
|
|
|
chr1
|
112548117
|
112548125
|
MSX2
|
JASPAR
|
yes
|
|
31554026
|
|
|
chr1
|
112548117
|
112548125
|
PDX1
|
JASPAR
|
yes
|
|
31554027
|
|
Genes associated with rs3000754[chr1:112548118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
112084840
|
112259313
|
+
|
RAP1A
|
ENSG00000116473.10
|
112084840
|
288805
|
Uterus
|
0.284066
|
1018
|
|
|
chr1
|
112084840
|
112259313
|
+
|
RAP1A
|
ENSG00000116473.10
|
112084840
|
288805
|
Adrenal
|
0.345332
|
1018
|
|