EnhancerDB
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  3. rs3077616[chr1:165819853]
Enhancers that have rs3077616[chr1:165819853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3077616[chr1:165819853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165819839 165819854 HNF1A JASPAR yes 32803394
chr1 165819847 165819868 IRF1 JASPAR yes 32803395
chr1 165819848 165819869 IRF1 JASPAR yes 32803396
chr1 165819850 165819871 IRF1 JASPAR yes 32803397
chr1 165819851 165819872 IRF1 JASPAR yes 32803398
chr1 165819852 165819867 FOXP1 JASPAR yes 32803399
chr1 165819852 165819873 IRF1 JASPAR yes 32803400
chr1 165819853 165819868 FOXP1 JASPAR yes 32803401
chr1 165819853 165819874 IRF1 JASPAR yes 32803402
Genes associated with rs3077616[chr1:165819853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More