EnhancerDB
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  3. rs311457[chr1:25342654]
Enhancers that have rs311457[chr1:25342654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs311457[chr1:25342654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25342650 25342661 FOXA1 JASPAR yes 27553798
chr1 25342650 25342665 FOXA1 JASPAR yes 27553799
chr1 25342651 25342662 FOXC1 JASPAR yes 27553800
chr1 25342651 25342663 FOXC2 JASPAR yes 27553801
chr1 25342654 25342662 FOXO3 JASPAR yes 27553802
Genes associated with rs311457[chr1:25342654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More