EnhancerDB
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  3. rs3216053[chr1:117021102]
Enhancers that have rs3216053[chr1:117021102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3216053[chr1:117021102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117020380 117021414 ZNF143 GTRD no Epithelial (MCF-7) 21332911
chr1 117020437 117021361 ZNF143 GTRD no Epithelial (MCF-7) 21332912
chr1 117020526 117021470 ZNF274 GTRD no Bone Marrow (K562) 21332913
chr1 117020530 117021386 ZNF143 GTRD no Epithelial (MCF-7) 21332914
chr1 117020754 117021248 ZNF274 GTRD no Bone Marrow (K562) 21332915
chr1 117020814 117021116 ZNF274 GTRD no Bone Marrow (K562) 21332916
chr1 117021091 117021108 BCL6B JASPAR yes 31811297
Genes associated with rs3216053[chr1:117021102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More