EnhancerDB
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  3. rs34131563[chr16:19393758]
Enhancers that have rs34131563[chr16:19393758]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19385025 19410955 enh16592
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs34131563[chr16:19393758]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19392870 19394564 ZNF274 GTRD no Cervix (HeLa-S3) 21695374
chr16 19392985 19394241 TCF7L2 GTRD no Colon (HCT116) 21695375
chr16 19393040 19394351 ZNF143 GTRD no Epithelial (MCF-7) 21695376
chr16 19393046 19394298 ZNF274 GTRD no Cervix (HeLa-S3) 21695377
chr16 19393157 19394250 TCF7L2 GTRD no Colon (HCT116) 21695378
chr16 19393199 19394545 ZNF274 GTRD no Bone Marrow (K562) 21695379
chr16 19393226 19394478 ZNF274 GTRD no Cervix (HeLa-S3) 21695380
chr16 19393231 19394413 ZNF274 GTRD no Cervix (HeLa-S3) 21695381
chr16 19393258 19394332 ZNF274 GTRD no Bone Marrow (K562) 21695382
chr16 19393270 19394104 ZNF274 GTRD no Bone Marrow (K562) 21695383
chr16 19393302 19394194 ZNF274 GTRD no Cervix (HeLa-S3) 21695384
chr16 19393309 19394298 ZNF274 GTRD no Bone Marrow (K562) 21695385
chr16 19393320 19394104 ZNF274 GTRD no Cervix (HeLa-S3) 21695386
chr16 19393341 19394379 TCF7L2 GTRD no Colon (HCT116) 21695387
chr16 19393377 19394237 ZNF274 GTRD no Cervix (HeLa-S3) 21695388
chr16 19393390 19394324 TCF7L2 GTRD no Colon (HCT116) 21695389
chr16 19393410 19394190 ZNF274 GTRD no Cervix (HeLa-S3) 21695390
chr16 19393426 19394254 ZNF274 GTRD no Cervix (HeLa-S3) 21695391
chr16 19393466 19394393 ZNF274 GTRD no Bone Marrow (K562) 21695392
chr16 19393473 19394261 ZNF274 GTRD no Cervix (HeLa-S3) 21695393
chr16 19393474 19394194 ZNF274 GTRD no Bone Marrow (K562) 21695394
chr16 19393485 19394215 ZNF274 GTRD no Cervix (HeLa-S3) 21695395
chr16 19393534 19394047 ZNF274 GTRD no Bone Marrow (K562) 21695396
chr16 19393539 19394113 ZNF274 GTRD no Bone Marrow (K562) 21695397
chr16 19393552 19394183 ZNF274 GTRD no Cervix (HeLa-S3) 21695398
chr16 19393578 19394194 ZNF274 GTRD no Cervix (HeLa-S3) 21695399
chr16 19393599 19394224 ZNF274 GTRD no Bone Marrow (K562) 21695400
chr16 19393602 19393932 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695401
chr16 19393603 19394230 ZNF274 GTRD no Bone Marrow (K562) 21695402
chr16 19393607 19394171 ZNF143 GTRD no Epithelial (MCF-7) 21695403
chr16 19393618 19394082 ZNF274 GTRD no Bone Marrow (K562) 21695404
chr16 19393618 19394084 ZNF274 GTRD no Bone Marrow (K562) 21695405
chr16 19393622 19394138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695406
chr16 19393634 19394263 ZNF143 GTRD no Epithelial (MCF-7) 21695407
chr16 19393639 19393832 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695408
chr16 19393644 19394181 ZNF274 GTRD no Cervix (HeLa-S3) 21695409
chr16 19393660 19394184 ZNF274 GTRD no Bone Marrow (K562) 21695410
chr16 19393664 19394048 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695411
chr16 19393666 19394163 ZNF274 GTRD no Bone Marrow (K562) 21695412
chr16 19393669 19394259 ZNF274 GTRD no Bone Marrow (K562) 21695413
chr16 19393677 19394067 ZNF274 GTRD no Bone Marrow (K562) 21695414
chr16 19393692 19393975 ZNF274 GTRD no Bone Marrow (K562) 21695415
chr16 19393728 19393980 ZNF143 GTRD no Epithelial (MCF-7) 21695416
chr16 19393728 19394181 ZNF274 GTRD no Bone Marrow (K562) 21695417
chr16 19393749 19393769 TBX19 JASPAR yes 9864575
Genes associated with rs34131563[chr16:19393758], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 19421818 19510435 + TMC5 ENSG00000103534.12 19421818 28060 Thyroid 6.81436e-47 14600