EnhancerDB
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  3. rs34227900[chr19:5049313]
Enhancers that have rs34227900[chr19:5049313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5042775 5071015 enh4976
Brain (SK-N-SH) Prostate (RWPE1) Bone (Osteoblast) Muscle (A673) Thyroid Blood (Karpas-422) Uterus Heart
Transcript factors that have rs34227900[chr19:5049313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5046716 5050066 TCF7L2 GTRD no Colon (HCT116) 108374262
chr19 5046716 5050066 TCF7L2 GTRD no Colon (HCT116) 108374263
chr19 5046782 5050636 TCF7L2 GTRD no Colon (HCT116) 108374265
chr19 5046782 5050636 TCF7L2 GTRD no Colon (HCT116) 108374266
chr19 5047139 5049417 TCF7L2 GTRD no Colon (HCT116) 108374268
chr19 5047139 5049696 TCF7L2 GTRD no Colon (HCT116) 108374269
chr19 5047585 5049557 ZNF143 GTRD no Epithelial (MCF-7) 108374277
chr19 5047685 5049724 ZBTB33 GTRD no Lung (A549) 108374283
chr19 5047752 5049755 ZBTB33 GTRD no Lung (A549) 108374289
chr19 5047806 5049801 ZBTB33 GTRD no Lung (A549) 108374292
chr19 5047843 5049891 ZBTB33 GTRD no Lung (A549) 108374301
chr19 5047848 5049627 ZBTB33 GTRD no Lung (A549) 108374306
chr19 5047860 5049992 ZBTB33 GTRD no Lung (A549) 108374310
chr19 5047865 5050094 TCF7L2 GTRD no Colon (HCT116) 108374313
chr19 5047901 5049651 ZBTB33 GTRD no Lung (A549) 108374322
chr19 5047926 5049632 ZBTB33 GTRD no Lung (A549) 108374330
chr19 5048020 5049701 ZBTB33 GTRD no Lung (A549) 108374354
chr19 5048069 5049410 TCF7L2 GTRD no Colon (HCT116) 108374369
chr19 5049292 5049313 ZNF263 JASPAR yes 112209572
chr19 5049303 5049313 SP1 JASPAR yes 112209574
Genes associated with rs34227900[chr19:5049313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More