EnhancerDB
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  3. rs34316489[chr17:60249568]
Enhancers that have rs34316489[chr17:60249568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60237265 60252315 enh17274
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs34316489[chr17:60249568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60248867 60249984 ZNF143 GTRD no Epithelial (MCF-7) 21777856
chr17 60248867 60249984 ZNF143 GTRD no Epithelial (MCF-7) 108280309
chr17 60249012 60249709 ZNF274 GTRD no Bone Marrow (K562) 21777858
chr17 60249012 60249709 ZNF274 GTRD no Bone Marrow (K562) 108280322
chr17 60249558 60249568 SP1 JASPAR yes 55189437
chr17 60249565 60249580 FOXP1 JASPAR yes 55189438
chr17 60249566 60249581 FOXP1 JASPAR yes 55189439
chr17 60249567 60249582 FOXP1 JASPAR yes 55189440
chr17 60249567 60249588 IRF1 JASPAR yes 55189441
chr17 60249568 60249583 FOXP1 JASPAR yes 55189442
Genes associated with rs34316489[chr17:60249568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More