EnhancerDB
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  3. rs34412722[chr5:172195133]
Enhancers that have rs34412722[chr5:172195133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs34412722[chr5:172195133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172195124 172195133 SOX9 JASPAR yes 67824549
chr5 172195130 172195134 TEAD2 TRANSFAC yes 67824550
chr5 172195130 172195135 TBP TRANSFAC yes 67824551
chr5 172195130 172195136 TFIID TRANSFAC yes 67824552
chr5 172195132 172195138 TBP TRANSFAC yes 67824553
Genes associated with rs34412722[chr5:172195133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More