EnhancerDB
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  3. rs34859522[chr1:179279400]
Enhancers that have rs34859522[chr1:179279400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 179277545 179282471 enh27289
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Pancreas Muscle (Myotube)
Transcript factors that have rs34859522[chr1:179279400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179279241 179280234 ZNF143 GTRD no Epithelial (MCF-7) 107847587
chr1 179279253 179280209 ZNF143 GTRD no Epithelial (MCF-7) 107847588
chr1 179279306 179280231 ZNF143 GTRD no Epithelial (MCF-7) 107847589
chr1 179279392 179280109 ZNF143 GTRD no Epithelial (MCF-7) 107847590
chr1 179279394 179279415 IRF1 JASPAR yes 33479324
chr1 179279396 179279411 PRDM1 JASPAR yes 33479325
chr1 179279396 179279411 STAT2 JASPAR yes 33479326
chr1 179279398 179279419 IRF1 JASPAR yes 33479327
chr1 179279398 179280062 ZNF143 GTRD no Epithelial (MCF-7) 107847591
chr1 179279399 179279414 FOXP1 JASPAR yes 33479328
chr1 179279400 179279415 FOXP1 JASPAR yes 33479329
Genes associated with rs34859522[chr1:179279400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More