EnhancerDB
  1. Home
  2. SNP
  3. rs34960055[chr1:42098443]
Enhancers that have rs34960055[chr1:42098443]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs34960055[chr1:42098443]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42098425 42098446 IRF1 JASPAR yes 28403626
chr1 42098428 42098443 FOXP1 JASPAR yes 28403628
chr1 42098437 42098452 FOXP1 JASPAR yes 28403629
chr1 42098443 42098449 TBP TRANSFAC yes 28403630
Genes associated with rs34960055[chr1:42098443], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More