EnhancerDB
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  3. rs35209954[chr17:77879485]
Enhancers that have rs35209954[chr17:77879485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs35209954[chr17:77879485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77879048 77880783 TCF7L2 GTRD no Colon (HCT116) 21796363
chr17 77879196 77879907 TCF7L2 GTRD no Colon (HCT116) 21796364
chr17 77879479 77879943 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21796365
chr17 77879484 77879494 ZNF740 JASPAR yes 56226808
chr17 77879485 77879495 SP1 JASPAR yes 56226809
chr17 77879485 77879495 ZNF740 JASPAR yes 56226810
Genes associated with rs35209954[chr17:77879485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More