EnhancerDB
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  3. rs35360287[chr1:42082240]
Enhancers that have rs35360287[chr1:42082240]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs35360287[chr1:42082240]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42082230 42082246 SOX4 JASPAR yes 28401656
chr1 42082232 42082240 DLX6 JASPAR yes 28401657
chr1 42082232 42082240 MSX1 JASPAR yes 28401658
chr1 42082234 42082255 IRF1 JASPAR yes 28401659
chr1 42082236 42082251 PRDM1 JASPAR yes 28401660
chr1 42082236 42082251 STAT2 JASPAR yes 28401661
chr1 42082239 42082254 FOXP1 JASPAR yes 28401662
chr1 42082240 42082255 FOXP1 JASPAR yes 28401663
Genes associated with rs35360287[chr1:42082240], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More