EnhancerDB
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  3. rs35542943[chr12:122931111]
Enhancers that have rs35542943[chr12:122931111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs35542943[chr12:122931111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122930997 122931273 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21579782
chr12 122931105 122931115 GSX1 JASPAR yes 124279694
chr12 122931105 122931115 GSX2 JASPAR yes 124279695
chr12 122931106 122931114 NKX6-1 JASPAR yes 124279696
chr12 122931106 122931114 NKX6-2 JASPAR yes 124279697
chr12 122931106 122931116 POU6F2 JASPAR yes 124279698
chr12 122931110 122931117 JUN TRANSFAC yes 124279699
chr12 122931110 122931117 SP1 TRANSFAC yes 124279700
Genes associated with rs35542943[chr12:122931111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More