EnhancerDB
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  3. rs35560402[chr1:17227452]
Enhancers that have rs35560402[chr1:17227452]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs35560402[chr1:17227452]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17227448 17227460 BHLHE23 JASPAR yes 27063528
chr1 17227449 17227459 BHLHE22 JASPAR yes 27063529
chr1 17227449 17227459 NEUROD2 JASPAR yes 27063530
chr1 17227449 17227459 OLIG2 JASPAR yes 27063531
chr1 17227449 17227459 OLIG3 JASPAR yes 27063532
Genes associated with rs35560402[chr1:17227452], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More