EnhancerDB
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  3. rs35560794[chr1:116862548]
Enhancers that have rs35560794[chr1:116862548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs35560794[chr1:116862548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116862543 116862558 MEF2C JASPAR yes 31794232
chr1 116862546 116862561 FOXP1 JASPAR yes 31794233
chr1 116862547 116862562 FOXP1 JASPAR yes 31794234
chr1 116862548 116862563 FOXP1 JASPAR yes 31794235
chr1 116862548 116862569 IRF1 JASPAR yes 31794236
Genes associated with rs35560794[chr1:116862548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More