EnhancerDB
  1. Home
  2. SNP
  3. rs36042079[chr1:220549929]
Enhancers that have rs36042079[chr1:220549929]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs36042079[chr1:220549929]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220549921 220549933 FOXC2 JASPAR yes 35490206
chr1 220549921 220549935 ONECUT1 JASPAR yes 35490207
chr1 220549921 220549935 ONECUT2 JASPAR yes 35490208
chr1 220549921 220549935 ONECUT3 JASPAR yes 35490209
chr1 220549922 220549932 CUX1 JASPAR yes 35490210
chr1 220549922 220549932 CUX2 JASPAR yes 35490211
chr1 220549922 220549933 FOXB1 JASPAR yes 35490212
chr1 220549922 220549933 FOXC1 JASPAR yes 35490213
chr1 220549923 220549944 IRF1 JASPAR yes 35490214
chr1 220549924 220549945 IRF1 JASPAR yes 35490215
chr1 220549926 220549947 IRF1 JASPAR yes 35490216
chr1 220549927 220549948 IRF1 JASPAR yes 35490217
chr1 220549928 220549943 FOXP1 JASPAR yes 35490218
chr1 220549928 220549949 IRF1 JASPAR yes 35490219
chr1 220549929 220549944 FOXP1 JASPAR yes 35490220
chr1 220549929 220549950 IRF1 JASPAR yes 35490221
Genes associated with rs36042079[chr1:220549929], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More