EnhancerDB
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  3. rs368562886[chr1:54871064]
Enhancers that have rs368562886[chr1:54871064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
Transcript factors that have rs368562886[chr1:54871064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54871051 54871066 TFAP2A JASPAR yes 28982580
chr1 54871054 54871065 TFAP2A JASPAR yes 28982581
chr1 54871054 54871066 TFAP2A JASPAR yes 28982582
chr1 54871054 54871066 TFAP2B JASPAR yes 28982583
chr1 54871054 54871066 TFAP2C JASPAR yes 28982584
chr1 54871058 54871073 TFAP2A JASPAR yes 28982585
chr1 54871060 54871075 TFAP2A JASPAR yes 28982586
chr1 54871060 54871075 TFAP2C JASPAR yes 28982587
chr1 54871061 54871072 TFAP2A JASPAR yes 28982588
chr1 54871061 54871072 TFAP2B JASPAR yes 28982589
chr1 54871061 54871072 TFAP2C JASPAR yes 28982590
chr1 54871061 54871073 INSM1 JASPAR yes 28982591
chr1 54871062 54871071 TFAP2A JASPAR yes 28982592
Genes associated with rs368562886[chr1:54871064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More