EnhancerDB
  1. Home
  2. SNP
  3. rs368952953[chr1:220539619]
Enhancers that have rs368952953[chr1:220539619]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs368952953[chr1:220539619]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220539606 220539621 STAT1 JASPAR yes 35488744
chr1 220539609 220539630 IRF1 JASPAR yes 35488745
chr1 220539611 220539621 GABPA JASPAR yes 35488746
chr1 220539611 220539622 FLI1 JASPAR yes 35488747
chr1 220539612 220539620 FEV JASPAR yes 35488749
chr1 220539613 220539620 SPI1 JASPAR yes 35488750
chr1 220539613 220539628 PRDM1 JASPAR yes 35488751
Genes associated with rs368952953[chr1:220539619], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More