EnhancerDB
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  3. rs369392690[chr1:54873192]
Enhancers that have rs369392690[chr1:54873192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54866345 54877955 enh11868
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Uterus Thymus
chr1 54873075 54873515 vista1656
VISTA
Transcript factors that have rs369392690[chr1:54873192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54871362 54873212 ZNF274 GTRD no Liver (HepG2) 107804945
chr1 54872891 54873467 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804946
chr1 54872918 54873258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804947
chr1 54872936 54873236 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804948
chr1 54872960 54873556 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107804949
chr1 54872986 54873670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804950
chr1 54872995 54873255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804951
chr1 54873022 54873512 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804952
chr1 54873058 54873514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804953
chr1 54873060 54873720 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804954
chr1 54873063 54873410 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804955
chr1 54873073 54873529 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804956
chr1 54873077 54873573 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804957
chr1 54873080 54873690 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804958
chr1 54873085 54873575 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804959
chr1 54873087 54873591 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804960
chr1 54873094 54873275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804961
chr1 54873131 54873507 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804962
chr1 54873133 54873653 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804963
chr1 54873133 54873749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804964
chr1 54873138 54873734 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804965
chr1 54873140 54873516 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804966
chr1 54873148 54873724 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107804967
chr1 54873150 54873526 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107804968
chr1 54873154 54873530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804969
chr1 54873155 54873699 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804970
chr1 54873164 54873640 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804971
chr1 54873171 54873389 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804972
chr1 54873172 54873616 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107804973
chr1 54873172 54873668 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107804974
chr1 54873174 54873614 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804975
chr1 54873177 54873613 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804976
chr1 54873177 54873647 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107804977
chr1 54873178 54873614 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804978
chr1 54873178 54873694 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804979
chr1 54873178 54873698 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804980
chr1 54873180 54873590 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107804981
chr1 54873186 54873596 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804982
chr1 54873186 54873870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804983
chr1 54873188 54873512 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804984
chr1 54873188 54873604 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804985
chr1 54873189 54873559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804986
chr1 54873192 54873562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804987
Genes associated with rs369392690[chr1:54873192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More