EnhancerDB
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  3. rs370797270[chr5:172729616]
Enhancers that have rs370797270[chr5:172729616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
chr5 172729503 172729731 vista50208
VISTA
Transcript factors that have rs370797270[chr5:172729616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172729332 172730116 TCF7L2 UCSC Txn Factor no Conserved 108537554
chr5 172729460 172730075 TFAP2C UCSC Txn Factor no Conserved 108537555
chr5 172729490 172730094 TFAP2A UCSC Txn Factor no Conserved 108537556
chr5 172729507 172729744 NFYB UCSC Txn Factor no Conserved 108537557
chr5 172729608 172729618 SMAD3 JASPAR yes 67865935
chr5 172729608 172729618 SMAD3 JASPAR yes 70765452
chr5 172729613 172729627 JUN JASPAR yes 67865936
chr5 172729613 172729627 JUN JASPAR yes 70765453
chr5 172729616 172729627 FOSL2 JASPAR yes 67865937
chr5 172729616 172729627 JUNB JASPAR yes 67865938
chr5 172729616 172729627 FOSL2 JASPAR yes 70765454
chr5 172729616 172729627 JUNB JASPAR yes 70765455
Genes associated with rs370797270[chr5:172729616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More