EnhancerDB
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  3. rs372038518[chr1:116853495]
Enhancers that have rs372038518[chr1:116853495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs372038518[chr1:116853495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116852038 116854512 ZNF143 GTRD no Epithelial (MCF-7) 21331955
chr1 116852222 116855719 ZNF143 GTRD no Epithelial (MCF-7) 21331958
chr1 116852458 116856181 ZNF274 GTRD no Cervix (HeLa-S3) 21331960
chr1 116852657 116856456 ZNF143 GTRD no Epithelial (MCF-7) 21331961
chr1 116852671 116854447 ZNF274 GTRD no Bone Marrow (K562) 21331962
chr1 116852687 116854276 ZNF274 GTRD no Bone Marrow (K562) 21331963
chr1 116852689 116854789 ZNF143 GTRD no Epithelial (MCF-7) 21331964
chr1 116852771 116854250 ZNF143 GTRD no Epithelial (MCF-7) 21331965
chr1 116852789 116856632 ZNF143 GTRD no Epithelial (MCF-7) 21331966
chr1 116852849 116854225 ZNF143 GTRD no Epithelial (MCF-7) 21331967
chr1 116852879 116854621 ZNF274 GTRD no Bone Marrow (K562) 21331968
chr1 116853035 116854353 ZNF274 GTRD no Bone Marrow (K562) 21331970
chr1 116853106 116854528 ZNF143 GTRD no Epithelial (MCF-7) 21331972
chr1 116853133 116854303 ZNF143 GTRD no Epithelial (MCF-7) 21331973
chr1 116853289 116854380 ZNF143 GTRD no Epithelial (MCF-7) 21331974
chr1 116853315 116854567 ZNF143 GTRD no Epithelial (MCF-7) 21331975
chr1 116853332 116854409 ZNF143 GTRD no Epithelial (MCF-7) 21331976
chr1 116853394 116854120 ZNF143 GTRD no Epithelial (MCF-7) 21331977
chr1 116853394 116854672 ZNF143 GTRD no Epithelial (MCF-7) 21331978
chr1 116853396 116854300 ZNF143 GTRD no Epithelial (MCF-7) 21331979
chr1 116853423 116854291 ZNF274 GTRD no Cervix (HeLa-S3) 21331980
chr1 116853441 116854107 ZNF143 GTRD no Epithelial (MCF-7) 21331981
chr1 116853448 116854783 ZNF274 GTRD no Bone Marrow (K562) 21331982
chr1 116853459 116854035 ZNF143 GTRD no Epithelial (MCF-7) 21331983
chr1 116853465 116854249 ZNF143 GTRD no Epithelial (MCF-7) 21331984
chr1 116853469 116854326 ZNF143 GTRD no Epithelial (MCF-7) 21331985
chr1 116853472 116854536 ZNF143 GTRD no Epithelial (MCF-7) 21331986
chr1 116853484 116853500 SOX8 JASPAR yes 31792730
chr1 116853490 116854715 ZNF143 GTRD no Epithelial (MCF-7) 21331987
chr1 116853495 116854330 ZNF143 GTRD no Epithelial (MCF-7) 21331988
Genes associated with rs372038518[chr1:116853495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More