EnhancerDB
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  3. rs3746040[chr19:1852649]
Enhancers that have rs3746040[chr19:1852649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs3746040[chr19:1852649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355215
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355216
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355217
chr19 1850599 1854179 ZNF274 GTRD no Blood (GM12878) 21832658
chr19 1850599 1856222 TCF7L2 GTRD no Colon (HCT116) 108355218
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355219
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355220
chr19 1850727 1858520 TCF7L2 GTRD no Colon (HCT116) 108355221
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 21832698
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355222
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355223
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355224
chr19 1851716 1852944 ZNF274 GTRD no Bone Marrow (K562) 21832702
chr19 1851750 1854173 ZNF274 GTRD no Bone Marrow (K562) 21832703
chr19 1851777 1852683 ZNF274 GTRD no Blood (GM12878) 21832705
chr19 1851964 1854134 ZNF274 GTRD no Blood (GM12878) 21832709
chr19 1851982 1852701 ZNF274 GTRD no Blood (GM12878) 21832710
chr19 1852617 1856671 ZNF143 GTRD no Epithelial (MCF-7) 108355225
Genes associated with rs3746040[chr19:1852649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More