EnhancerDB
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  3. rs3753411[chr1:54738159]
Enhancers that have rs3753411[chr1:54738159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3753411[chr1:54738159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54738147 54738161 RORA JASPAR yes 28967176
chr1 54738156 54738171 MEF2C JASPAR yes 28967178
chr1 54738158 54738173 FOXP1 JASPAR yes 28967179
chr1 54738159 54738174 FOXP1 JASPAR yes 28967180
chr1 54738159 54738180 IRF1 JASPAR yes 28967181
Genes associated with rs3753411[chr1:54738159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More