EnhancerDB
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  3. rs3753864[chr1:28390596]
Enhancers that have rs3753864[chr1:28390596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28387565 28408035 enh180
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
Transcript factors that have rs3753864[chr1:28390596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28390586 28390601 HNF1A JASPAR yes 27735747
chr1 28390587 28390597 HOXB2 JASPAR yes 27735748
chr1 28390587 28390597 HOXB3 JASPAR yes 27735749
chr1 28390587 28390597 MNX1 JASPAR yes 27735750
chr1 28390587 28390597 POU6F1 JASPAR yes 27735751
chr1 28390587 28390599 HNF1B JASPAR yes 27735752
chr1 28390587 28390600 HNF1B JASPAR yes 27735753
chr1 28390588 28390596 LMX1A JASPAR yes 27735754
chr1 28390588 28390596 LMX1B JASPAR yes 27735755
chr1 28390588 28390596 NKX6-1 JASPAR yes 27735756
chr1 28390588 28390596 NKX6-2 JASPAR yes 27735757
chr1 28390588 28390596 VAX1 JASPAR yes 27735758
chr1 28390588 28390596 VAX2 JASPAR yes 27735759
chr1 28390588 28390596 VSX1 JASPAR yes 27735760
chr1 28390588 28390596 VSX2 JASPAR yes 27735761
Genes associated with rs3753864[chr1:28390596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0 Ovary 0.124867 404