EnhancerDB
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  3. rs375761602[chr12:50057964]
Enhancers that have rs375761602[chr12:50057964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50054615 50059261 enh51206
Large Intestine Blood (GM12878) Peripheral Blood (MM.1S) Heart Stomach
Transcript factors that have rs375761602[chr12:50057964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50055363 50058069 ZNF143 GTRD no Epithelial (MCF-7) 108030462
chr12 50055411 50058641 ZNF143 GTRD no Epithelial (MCF-7) 108030466
chr12 50055547 50058511 ZNF143 GTRD no Epithelial (MCF-7) 108030473
chr12 50055572 50058553 ZNF143 GTRD no Epithelial (MCF-7) 108030476
chr12 50055579 50060395 ZNF143 GTRD no Epithelial (MCF-7) 108030477
chr12 50055579 50060395 ZNF143 GTRD no Epithelial (MCF-7) 108030478
chr12 50055611 50058366 ZNF143 GTRD no Epithelial (MCF-7) 108030482
chr12 50055626 50058441 ZBTB33 GTRD no Lung (A549) 108030483
chr12 50055663 50058467 ZNF143 GTRD no Epithelial (MCF-7) 108030487
chr12 50055678 50060309 ZNF143 GTRD no Epithelial (MCF-7) 108030488
chr12 50055678 50060309 ZNF143 GTRD no Epithelial (MCF-7) 108030489
chr12 50055692 50058112 ZNF143 GTRD no Epithelial (MCF-7) 108030490
chr12 50055697 50058579 TCF7L2 GTRD no Colon (HCT116) 108030491
chr12 50055717 50059338 TCF7L2 GTRD no Colon (HCT116) 108030493
chr12 50055717 50059338 TCF7L2 GTRD no Colon (HCT116) 108030494
chr12 50056612 50058497 ZNF143 GTRD no Epithelial (MCF-7) 108030500
chr12 50056646 50058248 ZNF274 GTRD no Bone Marrow (K562) 108030505
chr12 50056677 50058135 ZNF274 GTRD no Bone Marrow (K562) 108030512
chr12 50056744 50058014 ZBTB33 GTRD no Lung (A549) 108030526
chr12 50056765 50058253 TCF7L2 GTRD no Colon (HCT116) 108030532
chr12 50056800 50057994 ZNF274 GTRD no Bone Marrow (K562) 108030543
chr12 50056821 50058028 ZNF274 GTRD no Liver (HepG2) 108030552
chr12 50056827 50058284 ZNF274 GTRD no Bone Marrow (K562) 108030560
chr12 50056829 50058599 ZBTB33 GTRD no Brain (SK-N-SH) 108030563
chr12 50056886 50057973 ZNF274 GTRD no Cervix (HeLa-S3) 108030591
chr12 50056893 50058420 ZNF143 GTRD no Epithelial (MCF-7) 108030593
chr12 50056901 50057983 ZNF274 GTRD no Bone Marrow (K562) 108030595
chr12 50056902 50058334 TCF7L2 GTRD no Colon (HCT116) 108030596
chr12 50056943 50058230 TCF7L2 GTRD no Colon (HCT116) 108030606
chr12 50056958 50058094 ZNF143 GTRD no Epithelial (MCF-7) 108030607
chr12 50057034 50058201 ZNF274 GTRD no Blood (GM12878) 21544764
chr12 50057034 50058201 ZNF274 GTRD no Blood (GM12878) 108030614
chr12 50057066 50058086 ZNF274 GTRD no Cervix (HeLa-S3) 108030618
chr12 50057084 50058402 ZNF274 GTRD no Bone Marrow (K562) 108030621
chr12 50057088 50058467 TCF7L2 GTRD no Colon (HCT116) 108030622
chr12 50057111 50058466 TCF7L2 GTRD no Colon (HCT116) 108030623
chr12 50057142 50058262 TCF7L2 GTRD no Colon (HCT116) 108030627
chr12 50057144 50058012 ZNF274 GTRD no Bone Marrow (K562) 108030628
chr12 50057175 50059255 TCF7L2 GTRD no Colon (HCT116) 108030631
chr12 50057175 50059255 TCF7L2 GTRD no Colon (HCT116) 108030632
chr12 50057191 50058370 TCF7L2 GTRD no Colon (HCT116) 108030633
chr12 50057196 50058286 TCF7L2 GTRD no Colon (HCT116) 108030634
chr12 50057197 50058163 ZNF274 GTRD no Liver (HepG2) 108030635
chr12 50057209 50058150 TCF7L2 GTRD no Colon (HCT116) 108030636
chr12 50057210 50058132 TCF7L2 GTRD no Colon (HCT116) 108030637
chr12 50057239 50057999 ZNF274 GTRD no Bone Marrow (K562) 108030639
chr12 50057917 50058703 ZNF143 GTRD no Epithelial (MCF-7) 108030642
chr12 50057960 50057977 ESR1 JASPAR yes 120790918
chr12 50057960 50057978 ESR2 JASPAR yes 120790919
chr12 50057964 50057978 TLX1 JASPAR yes 120790920
Genes associated with rs375761602[chr12:50057964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More