EnhancerDB
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Enhancers that have rs3760960[chr19:3176170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3170105 3178875 enh17860
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs3760960[chr19:3176170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 21838666
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 108365292
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 21838667
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 108365293
chr19 3175698 3177785 ZNF274 GTRD no Blood (GM12878) 108365294
chr19 3175714 3177730 ZNF274 GTRD no Blood (GM12878) 108365295
chr19 3175716 3177551 ZNF274 GTRD no Blood (GM12878) 108365296
chr19 3175718 3177819 ZNF274 GTRD no Cervix (HeLa-S3) 21838668
chr19 3175718 3177819 ZNF274 GTRD no Cervix (HeLa-S3) 108365297
chr19 3175804 3177605 ZNF274 GTRD no Blood (GM12878) 108365298
chr19 3175834 3177750 ZBTB33 GTRD no Lung (A549) 108365299
chr19 3175896 3177545 ZNF274 GTRD no Blood (GM12878) 108365300
chr19 3175914 3177622 ZNF274 GTRD no Cervix (HeLa-S3) 21838669
chr19 3175914 3177622 ZNF274 GTRD no Cervix (HeLa-S3) 108365301
chr19 3175964 3177661 ZNF274 GTRD no Blood (GM12878) 108365302
chr19 3176145 3177683 ZNF274 GTRD no Cervix (HeLa-S3) 21838670
chr19 3176145 3177683 ZNF274 GTRD no Cervix (HeLa-S3) 108365303
chr19 3176167 3176179 GRHL1 JASPAR yes 112115296
chr19 3176168 3176171 MYB TRANSFAC yes 112115297
chr19 3176168 3176180 TGIF1 JASPAR yes 112115298
chr19 3176168 3176180 TGIF2 JASPAR yes 112115299
Genes associated with rs3760960[chr19:3176170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More