-
Home
- SNP
- rs376201546[chr12:50058387]
Enhancers that have rs376201546[chr12:50058387]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
50054615 |
50059261 |
enh51206 |
|
|
Transcript factors that have rs376201546[chr12:50058387]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
50055411
|
50058641
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030466
|
|
|
chr12
|
50055547
|
50058511
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030473
|
|
|
chr12
|
50055572
|
50058553
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030476
|
|
|
chr12
|
50055579
|
50060395
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030477
|
|
|
chr12
|
50055579
|
50060395
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030478
|
|
|
chr12
|
50055626
|
50058441
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108030483
|
|
|
chr12
|
50055663
|
50058467
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030487
|
|
|
chr12
|
50055678
|
50060309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030488
|
|
|
chr12
|
50055678
|
50060309
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030489
|
|
|
chr12
|
50055697
|
50058579
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030491
|
|
|
chr12
|
50055717
|
50059338
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030493
|
|
|
chr12
|
50055717
|
50059338
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030494
|
|
|
chr12
|
50056612
|
50058497
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030500
|
|
|
chr12
|
50056829
|
50058599
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108030563
|
|
|
chr12
|
50056893
|
50058420
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030593
|
|
|
chr12
|
50057084
|
50058402
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108030621
|
|
|
chr12
|
50057088
|
50058467
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030622
|
|
|
chr12
|
50057111
|
50058466
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030623
|
|
|
chr12
|
50057175
|
50059255
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030631
|
|
|
chr12
|
50057175
|
50059255
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030632
|
|
|
chr12
|
50057917
|
50058703
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030642
|
|
|
chr12
|
50057970
|
50060392
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108030643
|
|
|
chr12
|
50058353
|
50058883
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108030644
|
|
|
chr12
|
50058372
|
50058846
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108030645
|
|
|
chr12
|
50058382
|
50058400
|
SRF
|
JASPAR
|
yes
|
|
120791012
|
|
Genes associated with rs376201546[chr12:50058387], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |