EnhancerDB
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  3. rs376740602[chr1:42354665]
Enhancers that have rs376740602[chr1:42354665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs376740602[chr1:42354665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42354460 42354937 TCF7L2 GTRD no Colon (HCT116) 21325361
chr1 42354648 42354668 RREB1 JASPAR yes 28434000
chr1 42354651 42354666 RUNX2 JASPAR yes 28434001
chr1 42354656 42354676 RREB1 JASPAR yes 28434002
chr1 42354659 42354679 RREB1 JASPAR yes 28434003
chr1 42354661 42354681 RREB1 JASPAR yes 28434004
chr1 42354662 42354677 RUNX2 JASPAR yes 28434005
chr1 42354663 42354683 RREB1 JASPAR yes 28434006
Genes associated with rs376740602[chr1:42354665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More