EnhancerDB
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  3. rs3789478[chr1:6405285]
Enhancers that have rs3789478[chr1:6405285]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6400039 6410895 enh11442
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs3789478[chr1:6405285]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6405278 6405287 THAP1 JASPAR yes 26392533
chr1 6405278 6405291 ELF1 JASPAR yes 26392534
chr1 6405279 6405291 EHF JASPAR yes 26392535
chr1 6405279 6405291 ELF1 JASPAR yes 26392536
chr1 6405279 6405291 ELF4 JASPAR yes 26392537
chr1 6405279 6405292 ELF3 JASPAR yes 26392538
chr1 6405280 6405291 ELF5 JASPAR yes 26392539
chr1 6405280 6405291 SPDEF JASPAR yes 26392540
chr1 6405281 6405290 ELK4 JASPAR yes 26392541
chr1 6405281 6405291 ELK1 JASPAR yes 26392542
chr1 6405281 6405291 ELK3 JASPAR yes 26392543
chr1 6405281 6405291 ERF JASPAR yes 26392544
chr1 6405281 6405291 ERG JASPAR yes 26392545
chr1 6405281 6405291 ETS1 JASPAR yes 26392546
chr1 6405281 6405291 ETV1 JASPAR yes 26392547
chr1 6405281 6405291 ETV3 JASPAR yes 26392548
chr1 6405281 6405291 ETV4 JASPAR yes 26392549
chr1 6405281 6405291 ETV5 JASPAR yes 26392550
chr1 6405281 6405291 ETV6 JASPAR yes 26392551
chr1 6405281 6405291 FEV JASPAR yes 26392552
chr1 6405281 6405291 FLI1 JASPAR yes 26392553
chr1 6405281 6405291 GABPA JASPAR yes 26392554
chr1 6405281 6405292 ELK4 JASPAR yes 26392555
chr1 6405281 6405292 FLI1 JASPAR yes 26392556
chr1 6405282 6405290 FEV JASPAR yes 26392557
chr1 6405283 6405289 ETS1 JASPAR yes 26392558
chr1 6405283 6405289 SPI1 JASPAR yes 26392559
Genes associated with rs3789478[chr1:6405285], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More