EnhancerDB
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  3. rs3790459[chr1:156461707]
Enhancers that have rs3790459[chr1:156461707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156444279 156469175 enh658
Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
chr1 156461502 156461819 vista3459
VISTA
Transcript factors that have rs3790459[chr1:156461707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156459682 156461801 ZNF274 GTRD no Bone Marrow (K562) 107836353
chr1 156460141 156462427 ZNF274 GTRD no Bone Marrow (K562) 107836356
chr1 156460201 156462716 ZBTB33 GTRD no Lung (A549) 107836357
chr1 156460201 156462716 ZBTB33 GTRD no Lung (A549) 107836358
chr1 156460311 156462638 ZBTB33 GTRD no Lung (A549) 107836360
chr1 156460311 156462638 ZBTB33 GTRD no Lung (A549) 107836361
chr1 156460460 156462814 ZNF274 GTRD no Blood (GM12878) 21342200
chr1 156460460 156462814 ZNF274 GTRD no Blood (GM12878) 107836364
chr1 156460460 156462814 ZNF274 GTRD no Blood (GM12878) 107836365
chr1 156460505 156462681 ZNF274 GTRD no Blood (GM12878) 21342201
chr1 156460505 156462681 ZNF274 GTRD no Blood (GM12878) 107836367
chr1 156460505 156462681 ZNF274 GTRD no Blood (GM12878) 107836368
chr1 156460740 156462172 ZNF274 GTRD no Bone Marrow (K562) 107836369
chr1 156461032 156462138 AR GTRD no Prostate (PC-3) 107836370
chr1 156461179 156462784 ZNF274 GTRD no Blood (GM12878) 21342202
chr1 156461179 156462784 ZNF274 GTRD no Blood (GM12878) 107836374
chr1 156461179 156462784 ZNF274 GTRD no Blood (GM12878) 107836375
chr1 156461203 156463519 POLR2A UCSC Txn Factor no Conserved 107836377
chr1 156461203 156463519 POLR2A UCSC Txn Factor no Conserved 107836378
chr1 156461217 156461807 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342204
chr1 156461217 156461807 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107836379
chr1 156461232 156462424 ZBTB33 GTRD no Lung (A549) 107836380
chr1 156461256 156461756 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342205
chr1 156461256 156461756 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107836381
chr1 156461296 156462629 ZNF274 GTRD no Blood (GM12878) 21342206
chr1 156461296 156462629 ZNF274 GTRD no Blood (GM12878) 107836382
chr1 156461296 156462629 ZNF274 GTRD no Blood (GM12878) 107836383
chr1 156461309 156462757 ZNF143 GTRD no Epithelial (MCF-7) 107836384
chr1 156461309 156462757 ZNF143 GTRD no Epithelial (MCF-7) 107836385
chr1 156461327 156461783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836386
chr1 156461330 156461726 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836387
chr1 156461363 156461879 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342208
chr1 156461363 156461879 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107836389
chr1 156461421 156461711 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836391
chr1 156461426 156461710 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836392
chr1 156461471 156461707 POU2F2 UCSC Txn Factor no Conserved 107836395
chr1 156461476 156461712 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21342210
chr1 156461476 156461712 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107836396
chr1 156461548 156462339 ZBTB33 GTRD no Lung (A549) 107836397
chr1 156461553 156462244 ZBTB33 GTRD no Lung (A549) 107836398
chr1 156461558 156462443 ZBTB33 GTRD no Lung (A549) 107836399
chr1 156461618 156461978 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836400
chr1 156461619 156462135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107836401
chr1 156461677 156462792 ZNF143 GTRD no Epithelial (MCF-7) 107836402
chr1 156461677 156462792 ZNF143 GTRD no Epithelial (MCF-7) 107836403
chr1 156461705 156461720 HNF4A JASPAR yes 32391264
chr1 156461705 156461720 HNF4A JASPAR yes 118377294
chr1 156461706 156461721 HNF4G JASPAR yes 32391265
chr1 156461706 156461721 HNF4G JASPAR yes 118377295
Genes associated with rs3790459[chr1:156461707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 156433519 156470620 - MEF2D ENSG00000116604.13 156470620 0 Heart 0.0412251 1369