EnhancerDB
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  3. rs3817019[chr17:77898224]
Enhancers that have rs3817019[chr17:77898224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs3817019[chr17:77898224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77897814 77898318 ZNF274 GTRD no Blood (GM12878) 21796690
chr17 77897933 77898289 ZNF274 GTRD no Cervix (HeLa-S3) 21796691
chr17 77898022 77898682 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796693
chr17 77898183 77898543 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21796694
chr17 77898209 77898226 RARA JASPAR yes 56229557
chr17 77898211 77898501 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796695
chr17 77898218 77898225 E2F1 TRANSFAC yes 56229558
chr17 77898221 77898491 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21796696
Genes associated with rs3817019[chr17:77898224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More