EnhancerDB
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  3. rs3820108[chr1:54742005]
Enhancers that have rs3820108[chr1:54742005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54732705 54747095 enh11864
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3820108[chr1:54742005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54741994 54742005 ELK4 JASPAR yes 28967691
chr1 54741994 54742005 FLI1 JASPAR yes 28967692
chr1 54741994 54742007 ELF3 JASPAR yes 28967693
chr1 54741995 54742005 ETV6 JASPAR yes 28967694
chr1 54741995 54742006 ELF5 JASPAR yes 28967695
chr1 54741995 54742007 EHF JASPAR yes 28967696
chr1 54741995 54742007 ELF1 JASPAR yes 28967697
chr1 54741995 54742007 ELF4 JASPAR yes 28967698
chr1 54741995 54742008 ELF1 JASPAR yes 28967699
Genes associated with rs3820108[chr1:54742005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0 Liver 0.00169774 730