EnhancerDB
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  3. rs3842374[chr17:41438235]
Enhancers that have rs3842374[chr17:41438235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41431865 41453035 enh4419
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs3842374[chr17:41438235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41437508 41439103 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759769
chr17 41437704 41438469 AR GTRD no Prostate (PC-3) 21759773
chr17 41437705 41438969 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759774
chr17 41437743 41438957 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759776
chr17 41437765 41438301 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759777
chr17 41437815 41438251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759780
chr17 41437869 41438961 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759781
chr17 41437874 41438893 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759782
chr17 41437887 41438483 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21759783
chr17 41437901 41439062 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759785
chr17 41437921 41438904 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759786
chr17 41437938 41439060 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759787
chr17 41437996 41438735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759788
chr17 41438019 41438943 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21759789
chr17 41438056 41438950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759790
chr17 41438062 41438991 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759791
chr17 41438091 41438762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759792
chr17 41438095 41438475 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759793
chr17 41438099 41438867 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759794
chr17 41438119 41438523 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759795
chr17 41438122 41438626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759796
chr17 41438125 41438881 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759797
chr17 41438127 41438723 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21759798
chr17 41438142 41438923 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759799
chr17 41438154 41438550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759800
chr17 41438176 41438540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759801
chr17 41438177 41438761 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759802
chr17 41438177 41438817 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21759803
chr17 41438179 41438788 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759804
chr17 41438184 41438736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759805
chr17 41438186 41438870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759806
chr17 41438187 41438767 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759807
chr17 41438192 41438851 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759808
chr17 41438193 41438786 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759809
chr17 41438204 41438464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759810
chr17 41438206 41438590 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759811
chr17 41438231 41438859 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759812
chr17 41438235 41438238 MYB TRANSFAC yes 54338559
chr17 41438235 41438249 RXRB JASPAR yes 54338560
chr17 41438235 41438249 RXRG JASPAR yes 54338561
Genes associated with rs3842374[chr17:41438235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More