EnhancerDB
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  3. rs3850616[chr1:110183021]
Enhancers that have rs3850616[chr1:110183021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110173365 110188215 enh61883
Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Breast Uterus Blood (T-cell)
Transcript factors that have rs3850616[chr1:110183021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110182770 110183286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327039
chr1 110182772 110183302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327040
chr1 110182807 110183097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327041
chr1 110182858 110183188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327042
chr1 110182886 110183176 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327043
chr1 110182914 110183131 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327044
chr1 110182928 110183111 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21327045
chr1 110182969 110183116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327046
chr1 110182972 110183116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327047
chr1 110182988 110183504 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21327048
chr1 110183020 110183024 H4TF2 TRANSFAC yes 31432092
chr1 110183020 110183039 CTCF JASPAR yes 31432093
Genes associated with rs3850616[chr1:110183021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More