EnhancerDB
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  3. rs3886570[chr17:49515539]
Enhancers that have rs3886570[chr17:49515539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49502285 49519023 enh48044
Skin (Keratinocyte) Blood (T-cell) Esophagus Colon (HCT116) Thyroid Pancreas Spleen Thymus Heart
Transcript factors that have rs3886570[chr17:49515539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49514919 49515875 TCF7L2 GTRD no Colon (HCT116) 21772188
chr17 49515024 49515948 TCF7L2 GTRD no Colon (HCT116) 21772189
chr17 49515034 49515842 TCF7L2 GTRD no Colon (HCT116) 21772190
chr17 49515064 49515933 TCF7L2 GTRD no Colon (HCT116) 21772191
chr17 49515125 49517143 TCF7L2 GTRD no Colon (HCT116) 21772192
chr17 49515151 49515894 TCF7L2 GTRD no Colon (HCT116) 21772193
chr17 49515174 49515636 TCF7L2 GTRD no Colon (HCT116) 21772194
chr17 49515223 49515895 TCF7L2 GTRD no Colon (HCT116) 21772195
chr17 49515235 49515956 TCF7L2 GTRD no Colon (HCT116) 21772196
chr17 49515537 49515543 LEF1 TRANSFAC yes 54767041
chr17 49515537 49515543 SOX10 JASPAR yes 54767042
Genes associated with rs3886570[chr17:49515539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More