EnhancerDB
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  3. rs3898465[chr1:178653335]
Enhancers that have rs3898465[chr1:178653335]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178647285 178660595 enh761
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast)
Transcript factors that have rs3898465[chr1:178653335]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178652502 178654034 TCF7L2 GTRD no Colon (HCT116) 21352922
chr1 178652563 178653952 TCF7L2 GTRD no Colon (HCT116) 21352923
chr1 178652668 178653622 AR GTRD no Prostate (PC-3) 21352924
chr1 178652918 178653979 ZBTB33 GTRD no Lung (A549) 21352926
chr1 178652942 178653768 ZBTB33 GTRD no Lung (A549) 21352927
chr1 178652986 178653493 ZBTB33 GTRD no Lung (A549) 21352928
chr1 178653008 178653478 TCF7L2 GTRD no Colon (HCT116) 21352929
chr1 178653014 178653670 ZNF274 GTRD no Cervix (HeLa-S3) 21352930
chr1 178653052 178653484 TCF7L2 GTRD no Colon (HCT116) 21352931
chr1 178653057 178653570 TCF7L2 GTRD no Colon (HCT116) 21352932
chr1 178653109 178653601 ZBTB33 GTRD no Lung (A549) 21352933
chr1 178653118 178653576 ZBTB33 GTRD no Lung (A549) 21352934
Genes associated with rs3898465[chr1:178653335], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More