EnhancerDB
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  3. rs3935088[chr3:189428679]
Enhancers that have rs3935088[chr3:189428679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189426058 189435655 enh36256
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Blood (GM12878) Muscle (A673) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Kidney
chr3 189428483 189428800 vista43614
VISTA
Transcript factors that have rs3935088[chr3:189428679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189428395 189428852 RELA UCSC Txn Factor no Conserved 108531443
chr3 189428572 189428767 MAFK UCSC Txn Factor no Conserved 108531444
chr3 189428679 189428692 NFKB1 JASPAR yes 8584826
chr3 189428679 189428692 NFKB2 JASPAR yes 8584827
chr3 189428679 189428692 NFKB1 JASPAR yes 71106877
chr3 189428679 189428692 NFKB2 JASPAR yes 71106878
Genes associated with rs3935088[chr3:189428679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More