EnhancerDB
  1. Home
  2. SNP
  3. rs3935823[chr16:88451306]
Enhancers that have rs3935823[chr16:88451306]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88439193 88457015 enh57695
Prostate (PC-3) Epithelial (MCF-7) Esophagus Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Heart
Transcript factors that have rs3935823[chr16:88451306]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88447996 88453546 ZNF143 GTRD no Epithelial (MCF-7) 21736259
chr16 88447996 88453546 ZNF143 GTRD no Epithelial (MCF-7) 108222117
chr16 88447996 88453546 ZNF143 GTRD no Epithelial (MCF-7) 108222118
chr16 88448689 88458501 TCF7L2 GTRD no Colon (HCT116) 21736268
chr16 88448689 88458501 TCF7L2 GTRD no Colon (HCT116) 108222134
chr16 88450579 88453531 ZNF143 GTRD no Epithelial (MCF-7) 21736292
chr16 88450953 88457662 TCF7L2 GTRD no Colon (HCT116) 21736294
chr16 88450997 88456610 TCF7L2 GTRD no Colon (HCT116) 21736295
chr16 88451018 88454761 TCF7L2 GTRD no Colon (HCT116) 21736296
chr16 88451157 88460694 TCF7L2 GTRD no Colon (HCT116) 21736297
chr16 88451167 88453537 TCF7L2 GTRD no Colon (HCT116) 21736298
chr16 88451227 88453515 ZNF143 GTRD no Epithelial (MCF-7) 21736299
chr16 88451270 88457611 TCF7L2 GTRD no Colon (HCT116) 21736300
chr16 88451300 88451310 RELA JASPAR yes 12283262
Genes associated with rs3935823[chr16:88451306], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More