EnhancerDB
  1. Home
  2. SNP
  3. rs3949262[chr1:117018847]
Enhancers that have rs3949262[chr1:117018847]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3949262[chr1:117018847]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 21332839
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 107824269
chr1 117018678 117018970 ZNF274 GTRD no Bone Marrow (K562) 21332886
chr1 117018697 117018965 ZNF274 GTRD no Bone Marrow (K562) 21332887
chr1 117018747 117018921 ZNF274 GTRD no Bone Marrow (K562) 21332888
chr1 117018827 117019377 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21332889
Genes associated with rs3949262[chr1:117018847], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More