EnhancerDB
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  3. rs397688367[chr1:42235149]
Enhancers that have rs397688367[chr1:42235149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397688367[chr1:42235149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42235145 42235162 BCL6B JASPAR yes 28420032
chr1 42235146 42235161 STAT1 JASPAR yes 28420033
chr1 42235148 42235159 STAT1 JASPAR yes 28420034
chr1 42235148 42235159 STAT3 JASPAR yes 28420035
Genes associated with rs397688367[chr1:42235149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More