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- rs397782160[chr1:200412562]
Enhancers that have rs397782160[chr1:200412562]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
200395745 |
200424875 |
enh27417 |
|
|
Transcript factors that have rs397782160[chr1:200412562]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
200407168
|
200412701
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21363483
|
|
|
chr1
|
200408739
|
200412574
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21363494
|
|
|
chr1
|
200412552
|
200412562
|
MEF2A
|
JASPAR
|
yes
|
|
34448143
|
|
|
chr1
|
200412557
|
200412563
|
TBP
|
TRANSFAC
|
yes
|
|
34448145
|
|
|
chr1
|
200412559
|
200412574
|
SOX21
|
JASPAR
|
yes
|
|
34448146
|
|
Genes associated with rs397782160[chr1:200412562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |