EnhancerDB
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  3. rs397789675[chr1:201886769]
Enhancers that have rs397789675[chr1:201886769]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201879005 201889035 enh12530
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs397789675[chr1:201886769]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201881673 201889087 ZNF274 GTRD no Bone Marrow (K562) 107857153
chr1 201886762 201886776 FOXF2 JASPAR yes 34537557
chr1 201886763 201886777 GATA2 JASPAR yes 34537558
chr1 201886765 201886773 GATA3 JASPAR yes 34537559
chr1 201886765 201886776 FOXP2 JASPAR yes 34537560
chr1 201886767 201886775 FOXG1 JASPAR yes 34537561
chr1 201886767 201886775 FOXO3 JASPAR yes 34537562
Genes associated with rs397789675[chr1:201886769], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201865580 201915715 - LMOD1 ENSG00000163431.11 201915715 0 Heart 0.0204783 1713
chr1 201865580 201915715 - LMOD1 ENSG00000163431.11 201915715 0 Thyroid 0.0118273 1713