-
Home
- SNP
- rs397789980[chr17:2385155]
Enhancers that have rs397789980[chr17:2385155]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
2383605 |
2399907 |
enh32054 |
|
|
Transcript factors that have rs397789980[chr17:2385155]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
2379064
|
2387298
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108230821
|
|
|
chr17
|
2384438
|
2389264
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21739603
|
|
|
chr17
|
2384438
|
2389264
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108230822
|
|
|
chr17
|
2385140
|
2386053
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21739604
|
|
|
chr17
|
2385140
|
2386053
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108230823
|
|
|
chr17
|
2385145
|
2385160
|
STAT1
|
JASPAR
|
yes
|
|
52754152
|
|
|
chr17
|
2385149
|
2385164
|
FOXP1
|
JASPAR
|
yes
|
|
52754153
|
|
Genes associated with rs397789980[chr17:2385155], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
2680350
|
2941033
|
+
|
RAP1GAP2
|
ENSG00000132359.9
|
2680350
|
295195
|
Pancreas
|
0.262467
|
15243
|
|