EnhancerDB
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  3. rs397790605[chr1:46338861]
Enhancers that have rs397790605[chr1:46338861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397790605[chr1:46338861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46338849 46338870 IRF1 JASPAR yes 28624247
chr1 46338852 46338866 SPI1 JASPAR yes 28624248
chr1 46338852 46338866 SPIC JASPAR yes 28624249
chr1 46338856 46338877 IRF1 JASPAR yes 28624250
chr1 46338859 46338863 YY1 TRANSFAC yes 28624251
chr1 46338859 46338880 IRF1 JASPAR yes 28624252
chr1 46338860 46338875 FOXP1 JASPAR yes 28624253
chr1 46338861 46338876 FOXP1 JASPAR yes 28624254
Genes associated with rs397790605[chr1:46338861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More