EnhancerDB
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  3. rs397827473[chr1:222143229]
Enhancers that have rs397827473[chr1:222143229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 222129374 222148777 enh27556
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Astrocyte Lung (A549) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs397827473[chr1:222143229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222143209 222143230 ZNF263 JASPAR yes 35587189
chr1 222143210 222143231 ZNF263 JASPAR yes 35587190
chr1 222143217 222143230 ELF1 JASPAR yes 35587193
chr1 222143223 222143244 ZNF263 JASPAR yes 35587196
chr1 222143227 222143244 RXRA JASPAR yes 35587197
Genes associated with rs397827473[chr1:222143229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More